User profiles for "author:Foo Cheung"

Foo Cheung

NIH
Verified email at nih.gov
Cited by 11754

TIGR Gene Indices clustering tools (TGICL): a software system for fast clustering of large EST datasets

G Pertea, X Huang, F Liang, V Antonescu… - …, 2003 - academic.oup.com
TGICL is a pipeline for analysis of large Expressed Sequence Tags (EST) and mRNA
databases in which the sequences are first clustered based on pairwise sequence similarity …

[HTML][HTML] The Medicago genome provides insight into the evolution of rhizobial symbioses

ND Young, F Debellé, GED Oldroyd, R Geurts… - nature, 2011 - nature.com
Abstract Legumes (Fabaceae or Leguminosae) are unique among cultivated plants for their
ability to carry out endosymbiotic nitrogen fixation with rhizobial bacteria, a process that …

Arbuscular mycorrhizal symbiosis is accompanied by local and systemic alterations in gene expression and an increase in disease resistance in the shoots

J Liu, I Maldonado‐Mendoza, M Lopez‐Meyer… - The Plant …, 2007 - Wiley Online Library
In natural ecosystems, the roots of many plants exist in association with arbuscular
mycorrhizal (AM) fungi, and the resulting symbiosis has profound effects on the plant. The …

Comparative Genomics of Brassica oleracea and Arabidopsis thaliana Reveal Gene Loss, Fragmentation, and Dispersal after Polyploidy

CD Town, F Cheung, R Maiti, J Crabtree… - The Plant …, 2006 - academic.oup.com
We sequenced 2.2 Mb representing triplicated genome segments of Brassica oleracea,
which are each paralogous with one another and homologous with a segmentally …

[PDF][PDF] Global analyses of human immune variation reveal baseline predictors of postvaccination responses

JS Tsang, PL Schwartzberg, Y Kotliarov, A Biancotto… - Cell, 2014 - cell.com
A major goal of systems biology is the development of models that accurately predict
responses to perturbation. Constructing such models requires the collection of dense …

Phosphorus stress in common bean: root transcript and metabolic responses

G Hernández, M Ramírez, O Valdés-López… - Plant …, 2007 - academic.oup.com
Phosphorus (P) is an essential element for plant growth. Crop production of common bean
(Phaseolus vulgaris), the most important legume for human consumption, is often limited by …

Plasma proteomic signature of age in healthy humans

T Tanaka, A Biancotto, R Moaddel, AZ Moore… - Aging cell, 2018 - Wiley Online Library
To characterize the proteomic signature of chronological age, 1,301 proteins were
measured in plasma using the SOMAscan assay (SomaLogic, Boulder, CO, USA) in a …

Legume genome evolution viewed through the Medicago truncatula and Lotus japonicus genomes

SB Cannon, L Sterck, S Rombauts… - Proceedings of the …, 2006 - National Acad Sciences
Genome sequencing of the model legumes, Medicago truncatula and Lotus japonicus,
provides an opportunity for large-scale sequence-based comparison of two genomes in the …

[PDF][PDF] Time-resolved systems immunology reveals a late juncture linked to fatal COVID-19

C Liu, AJ Martins, WW Lau, N Rachmaninoff, J Chen… - Cell, 2021 - cell.com
COVID-19 exhibits extensive patient-to-patient heterogeneity. To link immune response
variation to disease severity and outcome over time, we longitudinally assessed circulating …

[HTML][HTML] Assessment of variability in the SOMAscan assay

J Candia, F Cheung, Y Kotliarov, G Fantoni, B Sellers… - Scientific reports, 2017 - nature.com
SOMAscan is an aptamer-based proteomics assay capable of measuring 1,305 human
protein analytes in serum, plasma, and other biological matrices with high sensitivity and …