Logistic regression analysis in discovery cohort, using gender as covariate
| CHR | Marker | Case | Control | Non-reference amino-acid | OR (95% CI) | P value |
| 6 | DQA1:160:A | 0.62 | 0.79 | DQA1:160:A | 0.44 (0.36 to 0.53) | 6.25E-17 |
| 6 | DQA1:34:E | 0.60 | 0.48 | DQA1:34:E | 1.66 (1.39 to 1.99) | 7.46E-09 |
| 6 | DRB1:31:F | 0.71 | 0.81 | DRB1:31:F | 0.58 (0.47 to 0.70) | 8.77E-08 |
| 6 | DRB1:10:Q | 0.70 | 0.60 | DRB1:10:Q | 1.58 (1.31 to 1.91) | 9.14E-07 |
P value less than 1.0×10−6 was considered as cut-off.