Table 2 PCR primers/assays and siRNA used
GenePrimer
MMP1F 5′-AAGATGAAAGGTGGACCAACAATT-3′
R 5′-CCAAGAGAATGGCCGAGTTC-3′
Probe 5′-FAM-CAGAGAGTACAACTTACATCGTGTTGCGGCTC-TAMRA-3′
MMP13F 5′-AAATTATGGAGGAGATGCCCATT-3′
R 5′-TCCTTGGAGTGGTCAAGACCTAA-3′
Probe 5′-FAM-CTACAACTTGTTTCTTGTTGCTGCGCATGA-TAMRA-3′
18SF 5′-CGAATGGCTCATTAAATCAGTTATGG-3′
R 5′-TATTAGCTCTAGAATTACCACAGTTATCC-3′
Probe 5′-FAM-TCCTTTGGTCGCTCGCTCCTCTCCC-TAMRA-3′
MyD88F 5′-CTTTTGGCAATCCTCCTCAA-3′
R 5′-CTGCTCGAGCTGCTTACCA-3′
TrifF 5′-CTCACCTGACCCCCTCCT-3′
R 5′-AATTTCTGTTCCGATGATGATTC-3′
TLR3F 5′-AGTTGTCATCGAATCAAATTAAAGAG-3′
R 5′-AATCTTCCAATTGCGTGAAAA-3′
TLR1Applied Biosystems: Assay Number: Hs00413978_m1
TLR2Applied Biosystems: Assay Number: Hs00152932_m1
TLR4Applied Biosystems: Assay Number: Hs00152939_m1
TLR6Applied Biosystems: Assay Number: Hs00271977_s1
18SApplied Biosystems: Assay Number: Hs99999901_s1
ID/siRNA
MyD88NM_002468/5′-GAAGAGAGCUGCUUAAACU-3′
M-004769-00/5′-GAGAGUAGCUGUGUUUGAA-3′
5′-CCAGAGCAAUUUAUACUUU-3′
5′-GCACAUACAGACUCACAUA-3′
TrifNM_014261/5′-GGACGAACACUCCCAGAUC-3′
M-012833-00/5′-CCAUAGACCACUCAGCUUU-3′
5′-GCCAGCAACUUGGAAAUCA-3′
5′-GGAGCCACAUGUCAUUUGG-3′
  • MMP, matrix metalloproteinase; TLR, Toll-like receptor.